COMPARISON OF PROTEIN PHYLOGENY RECONSTRUCTION METHODS ON NATURAL PROTEIN SEQUENCES
https://doi.org/10.1234/XXXX-XXXX-2010-4-11-13
Abstract
On a set of real protein sequences, comparison of several protein phylogeny reconstruction methods has been performed. The programs of PHYLIP package and programs FastME, PhyML and TreeTop have been tested. In contrast to several studies that used simulated sequences, our results demonstrate superiority of distance methods over the maximum likelihood method.
About the Authors
M. S. Krivozubov
факультет биоинженерии и биоинформатики и НИИ ФХБ имени А.Н. Белозерского МГУ
Russian Federation
Russian Federation
S. A. Spirin
факультет биоинженерии и биоинформатики и НИИ ФХБ имени А.Н. Белозерского МГУ
Russian Federation
Russian Federation
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Review
For citations:
Krivozubov M.S., Spirin S.A. COMPARISON OF PROTEIN PHYLOGENY RECONSTRUCTION METHODS ON NATURAL PROTEIN SEQUENCES. Vestnik Moskovskogo universiteta. Seriya 16. Biologiya. 2010;(4):11-13. (In Russ.) https://doi.org/10.1234/XXXX-XXXX-2010-4-11-13
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