THE REACTIVITY OF THE EXOMETABOLITES ALLOCATED IN THE CULTURES LIQUID OF MICROORGANISMS, AS A CRITERION OF COMPATIBILITY AT THE SELECTION OF THE MIXED CULTURES AND ARTIFICIAL ASSOCIATIONS
https://doi.org/10.1234/XXXX-XXXX-2011-1-32-35
Abstract
The reactivity of the exometabolites allocated in the culture liquid in cultures of actinomy- cetes, cyanobacteria and microalgae as possible using like the ecophysiological criterion of the selection of partners for the create mixed cultures and associative pairs of microorganisms has been considered.
About the Authors
A. H. Tambiev
кафедра биоинженерии
Russian Federation
Russian Federation
A. A. Lukyanov
кафедра биоинженерии
Russian Federation
Russian Federation
References
1. Claesson M.J., van Sinderen D., O’Toole P.W. The genus Lactobacillus — a genomic basis for understanding its di- versity // FEMS Microbiol. Let. 2007. Vol. 269. Is. 1. P. 22—28.
2. Маkarova K.S., Koonin E.V. Evolutionary genomics of lactic acid bacteria // J. Bacteriol. 2007. Vol. 189. P. 1199—1208.
3. Kao Y.T., Liu Y.S., Shyu Y.T. Identification of Lactobacillus spp. in probiotic products by real-time PCR and melting curve analysis // Food Research Int. 2007. Vol. 40. Is. 1. P. 71—79.
4. Stackebrandt E., Frederiksen W., Garrity G.M., Gri- mont P.A.D., Kampfer P., Maiden M.C.J., Nesme X., Rossello-Mora R., Swings J., Truper H.G., Vauterin L., Ward A.C., Whitman W.B. Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology // Int. J. Syst. Evol. Microbiol. 2002. Vol. 52. P. 1043—1047.
5. Chavagnat F., Haueter M., Jimeno J., Casey M.G. Comparison of partial tuf gene sequences for the identifi- cation of lactobacilli // FEMS Microbiology Letters. 2002. Vol. 217. P. 177—183.
6. Naser S.M., Dawyndt P., Hoste B., Gevers D., Vande- meulebroecke K., Cleenwerck I., Vancanneyt M., Swings J. Identification of lactobacilli by pheS and rpoA gene sequ- ence analyses // Int. J. Syst. Evol. Microbiol. 2007. Vol. 57. P. 2777—2789.
7. Blaiotta G., Fusco V., Ercolini D., Aponte M., Pepe O., Villani F. Lactobacillus strain diversity based on partial hsp60 gene sequences and design of PCR-restriction fragment length polymorphism assays for species identification and differentia- tion // Appl. Environ. Microbiol. 2008. Vol. 74. P. 208—215.
8. Morse R., Collins M.D., O’Hanlon K., Wallbanks S., Richardson P.T. Analysis of the beta’ subunit of DNA-de- pendent RNA polymerase does not support the hypothesis in- ferred from 16S rRNA analysis that Oenococcus oeni (formerly Leuconostoc oenos) is a tachytelic (fast-evolving) bacterium // Int. J. Syst. Bacteriol. 1996. Vol. 46. Is. 4. P. 1004—1009.
9. Adekambi T., Drancourt M., Raoult D. The rpoB gene as a tool for clinical microbiologists // Trends in Microbio- logy. 2009. Vol. 17. N 1.
10. Wilson K. Preparation of genomic DNA from bacteria, in Current Protocols in Molecular Biology (Ausu- bel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A. et al.). Wiley; New York, 1987. P. 241—245.
11. Werle E., Schneider C., Renner M., Vцlker M., Fiehn W. Convenient single-step, one tube purification of PCR products for direct sequencing // Nucleic Acids Res. 1994. Vol. 22. P. 4354—4355.
12. Ko K.S., Kim J.M., Kim J.W., Jung B.Y., Kim W., Kim I.J., Kook Y.-H. Identification of Bacillus anthracis by rpoB sequence analysis and multiplex PCR // J. Clinic. Mic- robiol. 2003. Vol. 41. Is. 7. P. 2908—2914.
13. Rantsiou K., Comi G., Cocolin L. The rpoB gene as a target for PCR-DGGE analysis to follow lactic acid bac- terial population dynamics during food fermentations // Food Microbiol. 2004. Vol. 21. P. 481—487.
14. Morse R., O’Hanlon K., Collins M.D. Phylogenetic, amino acid content and indel analyses of the beta subunit of DNA-dependent RNA polymerase of Gram-positive and Gram-negative bacteria // Int. J. Syst. Evol. Microbiol. 2002. Vol. 52. P. 1477—1484.
15. Pot B., Tsakalidou E. Taxonomy and metabolism of lactobacillus. Lactobacillus molecular biology from genomics to probiotics. L.: Caister Academic Press, 2009. P. 26—27.
16. Matte-Tailliez O., Brochier C., Forterre P., Philip- pe H. Archaeal phylogeny based on ribosomal proteins // Mol. Biol. Evol. 2002. Vol. 19. P. 631—639.
Review
For citations:
Tambiev A.H., Lukyanov A.A. THE REACTIVITY OF THE EXOMETABOLITES ALLOCATED IN THE CULTURES LIQUID OF MICROORGANISMS, AS A CRITERION OF COMPATIBILITY AT THE SELECTION OF THE MIXED CULTURES AND ARTIFICIAL ASSOCIATIONS. Vestnik Moskovskogo universiteta. Seriya 16. Biologiya. 2011;(1):32-35. (In Russ.) https://doi.org/10.1234/XXXX-XXXX-2011-1-32-35
Views:
287
Email this article 